Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01074	hp1	a0006	a0006c0011	a0006c0011t0005	a0006c0011t0005g0164	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01074	hp2	a0003	a0003c0005	a0003c0005t0003	a0003c0005t0003g0104	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01074	hp2	a0001	a0001c0026	a0001c0026t0001	a0001c0026t0001g0219	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01074	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0211	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01074	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0017	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01074	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0098	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01074	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0028	PUR	AMR	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0076	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0193	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0191	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01074	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0077	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01074	hp2	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0147	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0046	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01074	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	PUR	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01074	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG01074	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0144	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0324	PUR	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01074	hp1	a0002	a0002c0002	a0002c0002t0023	a0002c0002t0023g0026	PUR	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01074	hp2	a0001	a0001c0008	a0001c0008t0097	a0001c0008t0097g0131	PUR	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01074	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0022	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01074	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PUR	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01074	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0192	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01074	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0039	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG01074	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0002	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01074	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01074	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0181	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01074	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0293	PUR	AMR	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	HG01074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0242	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0231	PUR	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG01074	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0186	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01074	hp2	a0010	a0010c0030	a0010c0030t0001	a0010c0030t0001g0289	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01074	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0021	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01074	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0187	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01074	hp1	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0235	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01074	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0080	PUR	AMR	ABCA10	chr17	69143007	69233824