Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01168	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0035	PUR	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01168	hp1	a0010	a0010c0020	a0010c0020t0005	a0010c0020t0005g0024	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01168	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0048	PUR	AMR	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	HG01168	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0247	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01168	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0136	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01168	hp1	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0011	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01168	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0004	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01168	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0035	PUR	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01168	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01168	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0203	PUR	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01168	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0035	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01168	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0185	PUR	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0287	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01168	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0349	PUR	AMR	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01168	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0002	PUR	AMR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	HG01168	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0026	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	PUR	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01168	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0012	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01168	hp1	a0001	a0001c0013	a0001c0013t0002	a0001c0013t0002g0203	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0274	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	HG01168	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0089	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01168	hp2	a0001	a0001c0001	a0001c0001t0039	a0001c0001t0039g0246	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01168	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0014	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01168	hp2	a0003	a0003c0024	a0003c0024t0001	a0003c0024t0001g0057	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	HG01168	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0152	PUR	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG01168	hp2	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0111	PUR	AMR	ABCA5	chr17	69239311	69332133
ABCA8_chr17_68862289_68960392	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	PUR	AMR	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	HG01168	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0076	PUR	AMR	ABCA8	chr17	68862289	68960392
ABCB10_chr1_229511582_229563707	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0253	PUR	AMR	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	HG01168	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0062	PUR	AMR	ABCB10	chr1	229511582	229563707
ABCB6_chr2_219204772_219223958	HG01168	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	HG01168	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	ABCB6	chr2	219204772	219223958