Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0262	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA18940	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0139	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18940	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0044	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18940	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18940	hp1	a0002	a0002c0002	a0002c0002t0051	a0002c0002t0051g0022	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18940	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AAGAB_chr15_67195667_67259661	NA18940	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0200	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18940	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0129	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0191	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0364	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AASDH_chr4_56333290_56392491	NA18940	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0005	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0164	JPT	EAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18940	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0114	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18940	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0141	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18940	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0089	JPT	EAS	AATK	chr17	81112295	81171221
ABCA2_chr9_137002234_137033237	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18940	hp2	a0001	a0001c0017	a0001c0017t0001	a0001c0017t0001g0108	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA6_chr17_69073702_69146895	NA18940	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0177	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18940	hp2	a0005	a0005c0005	a0005c0005t0002	a0005c0005t0002g0007	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB1_chr7_87498017_87605884	NA18940	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0044	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18940	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0127	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB5_chr7_20610667_20762008	NA18940	hp1	a0020	a0020c0075	a0020c0075t0001	a0020c0075t0001g0357	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18940	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0048	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA18940	hp1	a0014	a0014c0017	a0014c0017t0002	a0014c0017t0002g0077	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18940	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18940	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0026	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCC2_chr10_99777640_99857594	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0209	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18940	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0038	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18940	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0219	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC5_chr3_183914934_184022884	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0145	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18940	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0238	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC8_chr11_17387885_17481845	NA18940	hp1	a0001	a0001c0012	a0001c0012t0001	a0001c0012t0001g0171	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA18940	hp2	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0134	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD1_chrX_153719856_153749755	NA18940	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD3_chr1_94413389_94523663	NA18940	hp1	a0001	a0001c0001	a0001c0001t0028	a0001c0001t0028g0050	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA18940	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0139	JPT	EAS	ABCD3	chr1	94413389	94523663