Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18946	hp2	a0001	a0001c0011	a0001c0011t0002	a0001c0011t0002g0184	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18946	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0226	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18946	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0034	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18946	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18946	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0109	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18946	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0114	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18946	hp1	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0006	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18946	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18946	hp1	a0006	a0006c0015	a0006c0015t0011	a0006c0015t0011g0024	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18946	hp2	a0002	a0002c0004	a0002c0004t0023	a0002c0004t0023g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18946	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18946	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0028	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18946	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0120	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18946	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0002	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18946	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0049	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18946	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0257	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18946	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0067	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0156	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18946	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0008	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18946	hp2	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18946	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0327	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18946	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0329	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18946	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0093	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18946	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18946	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18946	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0054	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18946	hp2	a0004	a0004c0004	a0004c0004t0006	a0004c0004t0006g0031	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18946	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0074	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18946	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0216	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18946	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0282	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA3_chr16_2270881_2345728	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18946	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0046	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA8_chr17_68862289_68960392	NA18946	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0229	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18946	hp2	a0032	a0032c0016	a0032c0016t0001	a0032c0016t0001g0062	JPT	EAS	ABCA8	chr17	68862289	68960392