Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18948	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0286	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18948	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0025	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18948	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0129	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18948	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0242	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18948	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0005	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18948	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0015	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18948	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18948	hp1	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18948	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0151	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18948	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0254	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18948	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0159	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA18948	hp1	a0002	a0002c0002	a0002c0002t0129	a0002c0002t0129g0241	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18948	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0129	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18948	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0087	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0045	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18948	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18948	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0032	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18948	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0148	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18948	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18948	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0147	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18948	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0196	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA18948	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0135	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18948	hp2	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0291	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18948	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0084	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18948	hp2	a0012	a0012c0011	a0012c0011t0002	a0012c0011t0002g0078	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA3_chr16_2270881_2345728	NA18948	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0020	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18948	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0235	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	NA18948	hp1	a0001	a0001c0006	a0001c0006t0018	a0001c0006t0018g0092	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18948	hp2	a0010	a0010c0015	a0010c0015t0001	a0010c0015t0001g0072	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18948	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0205	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18948	hp2	a0022	a0022c0026	a0022c0026t0002	a0022c0026t0002g0106	JPT	EAS	ABCA6	chr17	69073702	69146895