Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18956	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0063	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18956	hp2	a0001	a0001c0035	a0001c0035t0001	a0001c0035t0001g0189	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18956	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0231	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18956	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0152	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18956	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0380	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18956	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0130	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18956	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18956	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0019	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18956	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0144	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18956	hp2	a0002	a0002c0002	a0002c0002t0040	a0002c0002t0040g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0246	JPT	EAS	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18956	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0109	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18956	hp1	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0208	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18956	hp2	a0002	a0002c0002	a0002c0002t0051	a0002c0002t0051g0045	JPT	EAS	AAK1	chr2	69452997	69648739
AAR2_chr20_36231478_36261933	NA18956	hp1	a0004	a0004c0008	a0004c0008t0001	a0004c0008t0001g0119	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18956	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0204	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18956	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0211	JPT	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0043	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18956	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0249	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA18956	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0015	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18956	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0081	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18956	hp2	a0021	a0021c0028	a0021c0028t0003	a0021c0028t0003g0011	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCB10_chr1_229511582_229563707	NA18956	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0267	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCC5_chr3_183914934_184022884	NA18956	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0143	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18956	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0298	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCD2_chr12_39545033_39624803	NA18956	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0021	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0251	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	NA18956	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0319	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA18956	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0107	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCF1_chr6_30566442_30596522	NA18956	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0008	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF2_chr7_151206484_151232205	NA18956	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0010	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA18956	hp2	a0001	a0001c0005	a0001c0005t0005	a0001c0005t0005g0008	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCG1_chr21_42214140_42302244	NA18956	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0067	JPT	EAS	ABCG1	chr21	42214140	42302244
ABCG1_chr21_42214140_42302244	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0215	JPT	EAS	ABCG1	chr21	42214140	42302244
ABCG2_chr4_88085269_88163639	NA18956	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0309	JPT	EAS	ABCG2	chr4	88085269	88163639
ABCG2_chr4_88085269_88163639	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	JPT	EAS	ABCG2	chr4	88085269	88163639
ABCG4_chr11_119144052_119167653	NA18956	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABCG4	chr11	119144052	119167653
ABCG4_chr11_119144052_119167653	NA18956	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	ABCG4	chr11	119144052	119167653
ABHD10_chr3_111974026_111998368	NA18956	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	NA18956	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	ABHD10	chr3	111974026	111998368