Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2M_chr12_9062708_9120919	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0195	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0261	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18963	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0010	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18963	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18963	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0328	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18963	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0189	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18963	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0051	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18963	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0019	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0181	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18963	hp1	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0072	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18963	hp2	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18963	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0063	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18963	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0170	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18963	hp1	a0002	a0002c0002	a0002c0002t0131	a0002c0002t0131g0211	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18963	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0202	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18963	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0275	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0345	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA18963	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0036	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18963	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18963	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18963	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18963	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0008	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18963	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0200	JPT	EAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18963	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AATF	chr17	36943954	37061871
ABAT_chr16_8669617_8789570	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18963	hp2	a0002	a0002c0002	a0002c0002t0017	a0002c0002t0017g0188	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18963	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0167	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18963	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0025	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18963	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0092	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA6_chr17_69073702_69146895	NA18963	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0024	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB1_chr7_87498017_87605884	NA18963	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0148	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18963	hp2	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0015	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA18963	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18963	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0079	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB8_chr7_151023450_151052782	NA18963	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18963	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB8	chr7	151023450	151052782