Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18968	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0328	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18968	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18968	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0218	JPT	EAS	A3GALT2	chr1	33301766	33326098
AAAS_chr12_53302460_53326610	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0141	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL3_chr1_12711110_12733760	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18968	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0029	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18968	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0092	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18968	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0189	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18968	hp1	a0001	a0001c0001	a0001c0001t0058	a0001c0001t0058g0092	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18968	hp2	a0002	a0002c0002	a0002c0002t0038	a0002c0002t0038g0001	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0293	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18968	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18968	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0169	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18968	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0024	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA8_chr17_68862289_68960392	NA18968	hp1	a0016	a0016c0018	a0016c0018t0001	a0016c0018t0001g0235	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18968	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0061	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18968	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0217	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18968	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0011	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA18968	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0070	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB1_chr7_87498017_87605884	NA18968	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0169	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18968	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0301	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB8_chr7_151023450_151052782	NA18968	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0094	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18968	hp2	a0004	a0004c0005	a0004c0005t0004	a0004c0005t0004g0008	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCC1_chr16_15944616_16148053	NA18968	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0146	JPT	EAS	ABCC1	chr16	15944616	16148053
ABCC1_chr16_15944616_16148053	NA18968	hp2	a0001	a0001c0023	a0001c0023t0001	a0001c0023t0001g0077	JPT	EAS	ABCC1	chr16	15944616	16148053
ABCC2_chr10_99777640_99857594	NA18968	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0103	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0293	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA18968	hp1	a0006	a0006c0011	a0006c0011t0001	a0006c0011t0001g0270	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC4_chr13_95014835_95306451	NA18968	hp1	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0237	JPT	EAS	ABCC4	chr13	95014835	95306451
ABCC4_chr13_95014835_95306451	NA18968	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0144	JPT	EAS	ABCC4	chr13	95014835	95306451
ABCC5_chr3_183914934_184022884	NA18968	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0281	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18968	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0210	JPT	EAS	ABCC5	chr3	183914934	184022884