Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0065	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18969	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0033	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18969	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0190	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18969	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0144	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18969	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0116	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18969	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0008	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18969	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0022	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18969	hp1	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0211	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18969	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0194	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18969	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0024	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18969	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18969	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA18969	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18969	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18969	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0166	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0304	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18969	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0226	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18969	hp2	a0001	a0001c0003	a0001c0003t0030	a0001c0003t0030g0169	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18969	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0083	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18969	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0076	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0172	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18969	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18969	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0278	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18969	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA18969	hp1	a0002	a0002c0024	a0002c0024t0001	a0002c0024t0001g0234	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18969	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0142	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA10_chr17_69143007_69233824	NA18969	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18969	hp2	a0017	a0017c0033	a0017c0033t0002	a0017c0033t0002g0160	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA18969	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0192	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18969	hp2	a0016	a0016c0019	a0016c0019t0018	a0016c0019t0018g0117	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA5_chr17_69239311_69332133	NA18969	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0247	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18969	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0149	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18969	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0025	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18969	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0272	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18969	hp2	a0011	a0011c0013	a0011c0013t0001	a0011c0013t0001g0032	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18969	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0110	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18969	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0219	JPT	EAS	ABCA9	chr17	68969488	69065927