Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18973	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18973	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18973	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0076	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18973	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0111	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18973	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0115	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18973	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0042	JPT	EAS	AACS	chr12	125060435	125148316
AADAC_chr3_151809116_151833488	NA18973	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18973	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	NA18973	hp1	a0001	a0001c0001	a0001c0001t0076	a0001c0001t0076g0037	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18973	hp2	a0001	a0001c0003	a0001c0003t0080	a0001c0003t0080g0094	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18973	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0230	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18973	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18973	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18973	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0013	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18973	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18973	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0018	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18973	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0184	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18973	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0302	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18973	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0198	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18973	hp2	a0003	a0003c0024	a0003c0024t0001	a0003c0024t0001g0082	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18973	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0171	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18973	hp2	a0002	a0002c0005	a0002c0005t0004	a0002c0005t0004g0268	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18973	hp1	a0011	a0011c0012	a0011c0012t0008	a0011c0012t0008g0328	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18973	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0312	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18973	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0046	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA18973	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0236	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18973	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0140	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0054	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18973	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0237	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18973	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18973	hp2	a0027	a0027c0037	a0027c0037t0001	a0027c0037t0001g0159	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB1_chr7_87498017_87605884	NA18973	hp1	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0064	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18973	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0149	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA18973	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0016	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18973	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0073	JPT	EAS	ABCB4	chr7	87396696	87480680