Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18984	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18984	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0046	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18984	hp1	a0001	a0001c0001	a0001c0001t0036	a0001c0001t0036g0182	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA18984	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18984	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0176	JPT	EAS	A3GALT2	chr1	33301766	33326098
AACS_chr12_125060435_125148316	NA18984	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0302	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18984	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0120	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18984	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0035	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18984	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18984	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0133	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18984	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18984	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18984	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0024	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18984	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0227	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18984	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0372	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18984	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0052	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18984	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18984	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18984	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18984	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0008	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18984	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0294	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18984	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0069	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18984	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18984	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18984	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0020	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18984	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0222	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18984	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0309	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18984	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA18984	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0174	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18984	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0027	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA18984	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0124	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA18984	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0136	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	NA18984	hp1	a0006	a0006c0012	a0006c0012t0002	a0006c0012t0002g0140	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18984	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0225	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCB1_chr7_87498017_87605884	NA18984	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0109	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18984	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0275	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA18984	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0167	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18984	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0005	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB6_chr2_219204772_219223958	NA18984	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18984	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0003	JPT	EAS	ABCB6	chr2	219204772	219223958