Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18991	hp1	a0001	a0001c0001	a0001c0001t0049	a0001c0001t0049g0167	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18991	hp1	a0001	a0001c0008	a0001c0008t0002	a0001c0008t0002g0358	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18991	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0028	JPT	EAS	A2ML1	chr12	8817621	8881787
A4GNT_chr3_138118713_138137390	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18991	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18991	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18991	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA18991	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18991	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0013	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0349	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18991	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0235	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18991	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0039	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0363	JPT	EAS	AAMDC	chr11	77816144	77877352
AAR2_chr20_36231478_36261933	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0062	JPT	EAS	AAR2	chr20	36231478	36261933
AASDHPPT_chr11_106072662_106103695	NA18991	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0028	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18991	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	JPT	EAS	AATF	chr17	36943954	37061871
ABAT_chr16_8669617_8789570	NA18991	hp1	a0001	a0001c0001	a0001c0001t0037	a0001c0001t0037g0289	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18991	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0144	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	NA18991	hp1	a0005	a0005c0005	a0005c0005t0003	a0005c0005t0003g0103	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18991	hp2	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0035	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA18991	hp1	a0006	a0006c0089	a0006c0089t0003	a0006c0089t0003g0180	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18991	hp2	a0002	a0002c0011	a0002c0011t0012	a0002c0011t0012g0134	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	NA18991	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0098	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18991	hp2	a0010	a0010c0023	a0010c0023t0001	a0010c0023t0001g0212	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA8_chr17_68862289_68960392	NA18991	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0161	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0226	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB10_chr1_229511582_229563707	NA18991	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0058	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB11_chr2_168915781_169036324	NA18991	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0128	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0242	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB1_chr7_87498017_87605884	NA18991	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0161	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18991	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0246	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCC3_chr17_50629881_50697253	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0212	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0275	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC9_chr12_21792389_21946426	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	JPT	EAS	ABCC9	chr12	21792389	21946426
ABCC9_chr12_21792389_21946426	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	JPT	EAS	ABCC9	chr12	21792389	21946426
ABCF2_chr7_151206484_151232205	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA18991	hp2	a0001	a0001c0005	a0001c0005t0023	a0001c0005t0023g0045	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF3_chr3_184181199_184199005	NA18991	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCG4_chr11_119144052_119167653	NA18991	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0016	JPT	EAS	ABCG4	chr11	119144052	119167653
ABCG4_chr11_119144052_119167653	NA18991	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCG4	chr11	119144052	119167653