Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA19054	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0183	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0276	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA19054	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0125	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19054	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19054	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19054	hp2	a0001	a0001c0003	a0001c0003t0010	a0001c0003t0010g0056	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19054	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19054	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0174	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19054	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0126	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19054	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0194	JPT	EAS	AAGAB	chr15	67195667	67259661
AANAT_chr17_76462603_76475117	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19054	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19054	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AASS_chr7_122068549_122149249	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19054	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0177	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0195	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19054	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0154	JPT	EAS	AATF	chr17	36943954	37061871
ABCA10_chr17_69143007_69233824	NA19054	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0229	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19054	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0035	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	NA19054	hp1	a0001	a0001c0039	a0001c0039t0002	a0001c0039t0002g0109	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA19054	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0023	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19054	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0135	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19054	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0251	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19054	hp1	a0021	a0021c0032	a0021c0032t0001	a0021c0032t0001g0226	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19054	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0097	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA19054	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0076	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCC2_chr10_99777640_99857594	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0259	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCD2_chr12_39545033_39624803	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	NA19054	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0324	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA19054	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0172	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCE1_chr4_145093311_145134524	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0049	JPT	EAS	ABCE1	chr4	145093311	145134524
ABCE1_chr4_145093311_145134524	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0124	JPT	EAS	ABCE1	chr4	145093311	145134524
ABCF1_chr6_30566442_30596522	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA19054	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0027	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF2_chr7_151206484_151232205	NA19054	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0002	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA19054	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF3_chr3_184181199_184199005	NA19054	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA19054	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	JPT	EAS	ABCF3	chr3	184181199	184199005