Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19055	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A3GALT2_chr1_33301766_33326098	NA19055	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0057	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19055	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0143	JPT	EAS	A3GALT2	chr1	33301766	33326098
AACS_chr12_125060435_125148316	NA19055	hp1	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0237	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19055	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0276	JPT	EAS	AACS	chr12	125060435	125148316
AAGAB_chr15_67195667_67259661	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0315	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19055	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0196	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19055	hp1	a0001	a0001c0001	a0001c0001t0138	a0001c0001t0138g0209	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19055	hp2	a0002	a0002c0002	a0002c0002t0048	a0002c0002t0048g0039	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19055	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AARS1_chr16_70247298_70294506	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19055	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0185	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19055	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19055	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19055	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0020	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19055	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0019	JPT	EAS	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	NA19055	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0107	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19055	hp2	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0222	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA4_chr1_93987834_94126148	NA19055	hp1	a0001	a0001c0085	a0001c0085t0002	a0001c0085t0002g0278	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0105	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCB4_chr7_87396696_87480680	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0204	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19055	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB7_chrX_75046048_75161283	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC10_chr6_43422541_43455427	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA19055	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0003	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC2_chr10_99777640_99857594	NA19055	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0241	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA19055	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0067	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC8_chr11_17387885_17481845	NA19055	hp1	a0002	a0002c0047	a0002c0047t0001	a0002c0047t0001g0112	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0224	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD1_chrX_153719856_153749755	NA19055	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0009	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD3_chr1_94413389_94523663	NA19055	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0327	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD4_chr14_74280269_74307934	NA19055	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0059	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA19055	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCF1_chr6_30566442_30596522	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA19055	hp2	a0005	a0005c0005	a0005c0005t0001	a0005c0005t0001g0026	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF3_chr3_184181199_184199005	NA19055	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF3	chr3	184181199	184199005
ABHD11_chr7_73731094_73743802	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD11_chr7_73731094_73743802	NA19055	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD12B_chr14_50867053_50909970	NA19055	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	ABHD12B	chr14	50867053	50909970
ABHD12B_chr14_50867053_50909970	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	JPT	EAS	ABHD12B	chr14	50867053	50909970
ABHD16B_chr20_63856498_63867988	NA19055	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0000	JPT	EAS	ABHD16B	chr20	63856498	63867988
ABHD16B_chr20_63856498_63867988	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ABHD16B	chr20	63856498	63867988
ABHD17C_chr15_80690310_80760621	NA19055	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0226	JPT	EAS	ABHD17C	chr15	80690310	80760621
ABHD17C_chr15_80690310_80760621	NA19055	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0289	JPT	EAS	ABHD17C	chr15	80690310	80760621