Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19078	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	JPT	EAS	A1BG	chr19	58340183	58358492
A3GALT2_chr1_33301766_33326098	NA19078	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0200	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19078	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0010	JPT	EAS	A3GALT2	chr1	33301766	33326098
AACS_chr12_125060435_125148316	NA19078	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0144	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19078	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0252	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA19078	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0061	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AAGAB_chr15_67195667_67259661	NA19078	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0133	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19078	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0082	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19078	hp1	a0002	a0002c0002	a0002c0002t0019	a0002c0002t0019g0159	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19078	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0258	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19078	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0031	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	JPT	EAS	AAMDC	chr11	77816144	77877352
AARD_chr8_116933207_116949487	NA19078	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19078	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0183	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19078	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0210	JPT	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	NA19078	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19078	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0114	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
ABCA10_chr17_69143007_69233824	NA19078	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0124	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19078	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0169	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA19078	hp1	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0172	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19078	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0183	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA5_chr17_69239311_69332133	NA19078	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0150	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19078	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0268	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19078	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0175	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB11_chr2_168915781_169036324	NA19078	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB5_chr7_20610667_20762008	NA19078	hp1	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0210	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19078	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0270	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCC3_chr17_50629881_50697253	NA19078	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0049	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC8_chr11_17387885_17481845	NA19078	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0222	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0215	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD2_chr12_39545033_39624803	NA19078	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19078	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0040	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	NA19078	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0240	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD4_chr14_74280269_74307934	NA19078	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA19078	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0054	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCF3_chr3_184181199_184199005	NA19078	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCG2_chr4_88085269_88163639	NA19078	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0299	JPT	EAS	ABCG2	chr4	88085269	88163639
ABCG2_chr4_88085269_88163639	NA19078	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	JPT	EAS	ABCG2	chr4	88085269	88163639
ABHD11_chr7_73731094_73743802	NA19078	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD11_chr7_73731094_73743802	NA19078	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	ABHD11	chr7	73731094	73743802