Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19085	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0309	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0174	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0237	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA19085	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0124	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19085	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0033	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19085	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19085	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL3_chr1_12711110_12733760	NA19085	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0034	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19085	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19085	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0325	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19085	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0223	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19085	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0233	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19085	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0009	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0065	JPT	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	NA19085	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0188	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19085	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0055	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19085	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0314	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19085	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0128	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19085	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0176	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0053	JPT	EAS	AATF	chr17	36943954	37061871
ABCA10_chr17_69143007_69233824	NA19085	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0306	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19085	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0030	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA3_chr16_2270881_2345728	NA19085	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0015	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0238	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	NA19085	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0244	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19085	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0077	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19085	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19085	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0095	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA19085	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA19085	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0074	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB11_chr2_168915781_169036324	NA19085	hp1	a0001	a0001c0036	a0001c0036t0003	a0001c0036t0003g0244	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19085	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0066	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB4_chr7_87396696_87480680	NA19085	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0081	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19085	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	ABCB4	chr7	87396696	87480680