Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19087	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0224	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA19087	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19087	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0126	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19087	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0083	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19087	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0208	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19087	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19087	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0301	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19087	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0235	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19087	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19087	hp2	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19087	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0073	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19087	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19087	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0159	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19087	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0354	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0369	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19087	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0016	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19087	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19087	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19087	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0016	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19087	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0145	JPT	EAS	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	NA19087	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0008	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19087	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0028	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA19087	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0216	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19087	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0199	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19087	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0019	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19087	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0173	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA19087	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0223	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19087	hp2	a0008	a0008c0024	a0008c0024t0001	a0008c0024t0001g0285	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA6_chr17_69073702_69146895	NA19087	hp1	a0007	a0007c0006	a0007c0006t0002	a0007c0006t0002g0099	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19087	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0238	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19087	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0260	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA19087	hp1	a0014	a0014c0031	a0014c0031t0002	a0014c0031t0002g0236	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19087	hp2	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0278	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA19087	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0086	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA19087	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0236	JPT	EAS	ABCB10	chr1	229511582	229563707