Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19091	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19091	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19091	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0076	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19091	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0132	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19091	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0312	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19091	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19091	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19091	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0223	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19091	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0312	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19091	hp2	a0003	a0003c0004	a0003c0004t0006	a0003c0004t0006g0225	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19091	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19091	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL3_chr1_12711110_12733760	NA19091	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0060	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0238	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19091	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0157	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19091	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0013	JPT	EAS	AADAT	chr4	170055222	170094956
AAMP_chr2_218259129_218275137	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19091	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19091	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0073	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19091	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0092	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19091	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19091	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0048	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19091	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19091	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0116	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19091	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0131	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19091	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0211	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19091	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0164	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19091	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0036	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19091	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0278	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19091	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0211	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19091	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0249	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19091	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0131	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19091	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0154	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19091	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0032	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19091	hp2	a0001	a0001c0002	a0001c0002t0011	a0001c0002t0011g0165	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	NA19091	hp1	a0021	a0021c0028	a0021c0028t0003	a0021c0028t0003g0005	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA19091	hp2	a0018	a0018c0029	a0018c0029t0004	a0018c0029t0004g0070	JPT	EAS	ABCA13	chr7	48166458	48652497