Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	BEB	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	BEB	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0180	BEB	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03942	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0107	BEB	SAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0215	BEB	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03942	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0074	BEB	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03942	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	BEB	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03942	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0214	BEB	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03942	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0296	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03942	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0032	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03942	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0014	BEB	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03942	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	BEB	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	BEB	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03942	hp2	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0054	BEB	SAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG03942	hp1	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0001	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03942	hp2	a0001	a0001c0005	a0001c0005t0003	a0001c0005t0003g0010	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03942	hp1	a0020	a0020c0037	a0020c0037t0001	a0020c0037t0001g0001	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03942	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03942	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0031	BEB	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	BEB	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	BEB	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	BEB	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	BEB	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0288	BEB	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03942	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0273	BEB	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03942	hp1	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0031	BEB	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	BEB	SAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	HG03942	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	BEB	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03942	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	BEB	SAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG03942	hp1	a0007	a0007c0010	a0007c0010t0002	a0007c0010t0002g0041	BEB	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03942	hp2	a0002	a0002c0006	a0002c0006t0004	a0002c0006t0004g0023	BEB	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	BEB	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	BEB	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	BEB	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03942	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0258	BEB	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03942	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0132	BEB	SAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	HG03942	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0232	BEB	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG03942	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0155	BEB	SAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG03942	hp1	a0002	a0002c0057	a0002c0057t0001	a0002c0057t0001g0241	BEB	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03942	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0069	BEB	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03942	hp1	a0001	a0001c0001	a0001c0001t0039	a0001c0001t0039g0101	BEB	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03942	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0260	BEB	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03942	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0301	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03942	hp2	a0024	a0024c0027	a0024c0027t0001	a0024c0027t0001g0227	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG03942	hp1	a0004	a0004c0008	a0004c0008t0001	a0004c0008t0001g0036	BEB	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	BEB	SAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	HG03942	hp1	a0001	a0001c0003	a0001c0003t0012	a0001c0003t0012g0089	BEB	SAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG03942	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	BEB	SAS	ABCA3	chr16	2270881	2345728