Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02683	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0058	PJL	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PJL	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02683	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0172	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02683	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0143	PJL	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02683	hp1	a0003	a0003c0023	a0003c0023t0003	a0003c0023t0003g0256	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02683	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0345	PJL	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02683	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0226	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02683	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0207	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG02683	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02683	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	PJL	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PJL	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02683	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0142	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02683	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0057	PJL	SAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG02683	hp1	a0001	a0001c0001	a0001c0001t0031	a0001c0001t0031g0023	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02683	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0021	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0205	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	PJL	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0330	PJL	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02683	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0038	PJL	SAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0319	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02683	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0046	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PJL	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	PJL	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02683	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02683	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02683	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0317	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02683	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0312	PJL	SAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PJL	SAS	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	HG02683	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0205	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02683	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0264	PJL	SAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG02683	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0254	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02683	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0144	PJL	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02683	hp1	a0001	a0001c0003	a0001c0003t0035	a0001c0003t0035g0266	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02683	hp2	a0001	a0001c0001	a0001c0001t0043	a0001c0001t0043g0056	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA2_chr9_137002234_137033237	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	PJL	SAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02683	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0015	PJL	SAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG02683	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0169	PJL	SAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02683	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0237	PJL	SAS	ABCA3	chr16	2270881	2345728
ABCA8_chr17_68862289_68960392	HG02683	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0168	PJL	SAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	HG02683	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0179	PJL	SAS	ABCA8	chr17	68862289	68960392