Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03492	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	PJL	SAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG03492	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03492	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0003	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03492	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0238	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03492	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0014	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03492	hp1	a0002	a0002c0003	a0002c0003t0008	a0002c0003t0008g0042	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03492	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0310	PJL	SAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PJL	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03492	hp2	a0002	a0002c0002	a0002c0002t0007	a0002c0002t0007g0112	PJL	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03492	hp1	a0001	a0001c0001	a0001c0001t0039	a0001c0001t0039g0045	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03492	hp2	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0041	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03492	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0021	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03492	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0019	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03492	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0030	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03492	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03492	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0013	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03492	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03492	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0010	PJL	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03492	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0128	PJL	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PJL	SAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG03492	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0261	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0330	PJL	SAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG03492	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03492	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03492	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03492	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0248	PJL	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03492	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0137	PJL	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG03492	hp1	a0001	a0001c0001	a0001c0001t0027	a0001c0001t0027g0210	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03492	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0051	PJL	SAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG03492	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0025	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03492	hp2	a0004	a0004c0029	a0004c0029t0001	a0004c0029t0001g0021	PJL	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03492	hp1	a0002	a0002c0005	a0002c0005t0008	a0002c0005t0008g0016	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03492	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0095	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03492	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0052	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03492	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0296	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG03492	hp1	a0001	a0001c0011	a0001c0011t0005	a0001c0011t0005g0089	PJL	SAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG03492	hp2	a0001	a0001c0049	a0001c0049t0002	a0001c0049t0002g0057	PJL	SAS	ABCA12	chr2	214926542	215143626