Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03704	hp2	a0001	a0001c0001	a0001c0001t0010	a0001c0001t0010g0071	PJL	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03704	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03704	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0264	PJL	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03704	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0087	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03704	hp2	a0005	a0005c0009	a0005c0009t0001	a0005c0009t0001g0056	PJL	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03704	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0124	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03704	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03704	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0009	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03704	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0313	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03704	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0012	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03704	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0015	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03704	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	PJL	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PJL	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03704	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0166	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03704	hp2	a0002	a0002c0002	a0002c0002t0007	a0002c0002t0007g0146	PJL	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03704	hp1	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0007	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03704	hp2	a0001	a0001c0005	a0001c0005t0003	a0001c0005t0003g0010	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03704	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0021	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03704	hp2	a0003	a0003c0009	a0003c0009t0005	a0003c0009t0005g0140	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03704	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0032	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0193	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03704	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0059	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	PJL	SAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG03704	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0253	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0305	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0053	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	PJL	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	PJL	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03704	hp1	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03704	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0234	PJL	SAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG03704	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG03704	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0130	PJL	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03704	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	PJL	SAS	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	HG03704	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0306	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03704	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0127	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03704	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0099	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03704	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0302	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG03704	hp1	a0003	a0003c0009	a0003c0009t0003	a0003c0009t0003g0073	PJL	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG03704	hp2	a0008	a0008c0006	a0008c0006t0001	a0008c0006t0001g0087	PJL	SAS	ABCA1	chr9	104776006	104933155