Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	STU	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG04204	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0056	STU	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG04204	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0144	STU	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG04204	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0274	STU	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG04204	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0047	STU	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	STU	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0171	STU	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG04204	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	STU	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG04204	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0048	STU	SAS	A3GALT2	chr1	33301766	33326098
AACS_chr12_125060435_125148316	HG04204	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	STU	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG04204	hp2	a0003	a0003c0019	a0003c0019t0001	a0003c0019t0001g0184	STU	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG04204	hp1	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0088	STU	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG04204	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0082	STU	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG04204	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0019	STU	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG04204	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	STU	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG04204	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0053	STU	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	STU	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	STU	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG04204	hp1	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0352	STU	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG04204	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0145	STU	SAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	STU	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG04204	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	STU	SAS	AANAT	chr17	76462603	76475117
AARS1_chr16_70247298_70294506	HG04204	hp1	a0001	a0001c0012	a0001c0012t0001	a0001c0012t0001g0316	STU	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG04204	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0315	STU	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG04204	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0009	STU	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	STU	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	STU	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG04204	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	STU	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	STU	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG04204	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0133	STU	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG04204	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0259	STU	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG04204	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0225	STU	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG04204	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0044	STU	SAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	HG04204	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0358	STU	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG04204	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0229	STU	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG04204	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0164	STU	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG04204	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0116	STU	SAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	HG04204	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0057	STU	SAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG04204	hp2	a0008	a0008c0013	a0008c0013t0002	a0008c0013t0002g0088	STU	SAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	HG04204	hp1	a0005	a0005c0026	a0005c0026t0004	a0005c0026t0004g0042	STU	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG04204	hp2	a0030	a0030c0100	a0030c0100t0009	a0030c0100t0009g0268	STU	SAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG04204	hp1	a0002	a0002c0026	a0002c0026t0001	a0002c0026t0001g0073	STU	SAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG04204	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0111	STU	SAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG04204	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0157	STU	SAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG04204	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	STU	SAS	ABCA3	chr16	2270881	2345728