Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG02280	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0279	ACB	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02280	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0258	ACB	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02280	hp1	a0016	a0016c0030	a0016c0030t0002	a0016c0030t0002g0022	ACB	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02280	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0266	ACB	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02280	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0087	ACB	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0223	ACB	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02280	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0015	ACB	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02280	hp2	a0002	a0002c0002	a0002c0002t0000	a0002c0002t0000g0111	ACB	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02280	hp1	a0002	a0002c0008	a0002c0008t0001	a0002c0008t0001g0270	ACB	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02280	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0233	ACB	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	ACB	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02280	hp2	a0001	a0001c0003	a0001c0003t0009	a0001c0003t0009g0069	ACB	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02280	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0048	ACB	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	ACB	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02280	hp1	a0002	a0002c0007	a0002c0007t0001	a0002c0007t0001g0016	ACB	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0077	ACB	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02280	hp1	a0001	a0001c0001	a0001c0001t0064	a0001c0001t0064g0123	ACB	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02280	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0069	ACB	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02280	hp1	a0005	a0005c0006	a0005c0006t0006	a0005c0006t0006g0007	ACB	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02280	hp2	a0004	a0004c0007	a0004c0007t0015	a0004c0007t0015g0044	ACB	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02280	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0042	ACB	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02280	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0066	ACB	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02280	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	ACB	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	ACB	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	ACB	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	ACB	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02280	hp1	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0025	ACB	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02280	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0321	ACB	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02280	hp1	a0001	a0001c0001	a0001c0001t0124	a0001c0001t0124g0188	ACB	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02280	hp2	a0001	a0001c0009	a0001c0009t0125	a0001c0009t0125g0179	ACB	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02280	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0014	ACB	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02280	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0019	ACB	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	ACB	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	ACB	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02280	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0032	ACB	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	ACB	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02280	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0007	ACB	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	ACB	AFR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	ACB	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	ACB	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02280	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0008	ACB	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02280	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0030	ACB	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02280	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	ACB	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	ACB	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02280	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0214	ACB	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02280	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0316	ACB	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02280	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0039	ACB	AFR	AASS	chr7	122068549	122149249