Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19030	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0026	LWK	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19030	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0034	LWK	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0221	LWK	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0225	LWK	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19030	hp1	a0013	a0013c0021	a0013c0021t0002	a0013c0021t0002g0117	LWK	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19030	hp2	a0009	a0009c0015	a0009c0015t0001	a0009c0015t0001g0200	LWK	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19030	hp1	a0016	a0016c0013	a0016c0013t0002	a0016c0013t0002g0049	LWK	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19030	hp2	a0015	a0015c0020	a0015c0020t0002	a0015c0020t0002g0080	LWK	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19030	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0202	LWK	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19030	hp2	a0001	a0001c0006	a0001c0006t0000	a0001c0006t0000g0049	LWK	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19030	hp1	a0001	a0001c0009	a0001c0009t0013	a0001c0009t0013g0213	LWK	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19030	hp2	a0001	a0001c0007	a0001c0007t0004	a0001c0007t0004g0394	LWK	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19030	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	LWK	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19030	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	LWK	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	LWK	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	LWK	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA19030	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0213	LWK	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	LWK	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19030	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0016	LWK	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19030	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0021	LWK	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	LWK	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0236	LWK	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19030	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0176	LWK	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19030	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0026	LWK	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19030	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0086	LWK	AFR	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	NA19030	hp1	a0001	a0001c0003	a0001c0003t0022	a0001c0003t0022g0010	LWK	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19030	hp2	a0001	a0001c0006	a0001c0006t0041	a0001c0006t0041g0008	LWK	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	LWK	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19030	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0239	LWK	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	LWK	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	LWK	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19030	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0036	LWK	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19030	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0006	LWK	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19030	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0009	LWK	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	LWK	AFR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19030	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0012	LWK	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	LWK	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	LWK	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19030	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0108	LWK	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	LWK	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	LWK	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19030	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0290	LWK	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0318	LWK	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0141	LWK	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19030	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	LWK	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19030	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	LWK	AFR	AATF	chr17	36943954	37061871