Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG06807	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	USA	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG06807	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0016	USA	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG06807	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	USA	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG06807	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0006	USA	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG06807	hp1	a0004	a0004c0014	a0004c0014t0004	a0004c0014t0004g0237	USA	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG06807	hp2	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0003	USA	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG06807	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	USA	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG06807	hp2	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0137	USA	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG06807	hp1	a0012	a0012c0010	a0012c0010t0000	a0012c0010t0000g0149	USA	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG06807	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0090	USA	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG06807	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0368	USA	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG06807	hp2	a0001	a0001c0002	a0001c0002t0011	a0001c0002t0011g0277	USA	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG06807	hp1	a0002	a0002c0004	a0002c0004t0008	a0002c0004t0008g0073	USA	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	USA	AFR	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG06807	hp1	a0002	a0002c0007	a0002c0007t0001	a0002c0007t0001g0027	USA	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	USA	AFR	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG06807	hp1	a0004	a0004c0010	a0004c0010t0012	a0004c0010t0012g0013	USA	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG06807	hp2	a0009	a0009c0013	a0009c0013t0010	a0009c0013t0010g0002	USA	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG06807	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0257	USA	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0044	USA	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG06807	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0037	USA	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG06807	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0027	USA	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG06807	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	USA	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	USA	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG06807	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0059	USA	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG06807	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0060	USA	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG06807	hp1	a0001	a0001c0026	a0001c0026t0152	a0001c0026t0152g0295	USA	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG06807	hp2	a0001	a0001c0007	a0001c0007t0035	a0001c0007t0035g0271	USA	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG06807	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0093	USA	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	USA	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG06807	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	USA	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	USA	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG06807	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	USA	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	USA	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG06807	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	USA	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG06807	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	USA	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG06807	hp1	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0320	USA	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	USA	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG06807	hp1	a0003	a0003c0005	a0003c0005t0006	a0003c0005t0006g0013	USA	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG06807	hp2	a0009	a0009c0015	a0009c0015t0007	a0009c0015t0007g0079	USA	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG06807	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0023	USA	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	USA	AFR	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	HG06807	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0270	USA	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG06807	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0124	USA	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG06807	hp1	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0097	USA	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG06807	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	USA	AFR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG06807	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0037	USA	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG06807	hp2	a0007	a0007c0008	a0007c0008t0001	a0007c0008t0001g0118	USA	AFR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG06807	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0010	USA	AFR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG06807	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0029	USA	AFR	ABAT	chr16	8669617	8789570