Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01123	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0023	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01123	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0115	CLM	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01123	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0005	CLM	AMR	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG01123	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	CLM	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01123	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0121	CLM	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01123	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0037	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01123	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0095	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01123	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0305	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01123	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0200	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01123	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01123	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0157	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CLM	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01123	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0288	CLM	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	CLM	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01123	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0117	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	CLM	AMR	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	HG01123	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0087	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01123	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0010	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0148	CLM	AMR	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG01123	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0268	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01123	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01123	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01123	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01123	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01123	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01123	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0180	CLM	AMR	AARS1	chr16	70247298	70294506
AASDH_chr4_56333290_56392491	HG01123	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0115	CLM	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01123	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0179	CLM	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01123	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01123	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	CLM	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01123	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0317	CLM	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01123	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	CLM	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01123	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0105	CLM	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01123	hp2	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0259	CLM	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01123	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0058	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01123	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0263	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01123	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0134	CLM	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01123	hp2	a0001	a0001c0016	a0001c0016t0002	a0001c0016t0002g0086	CLM	AMR	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG01123	hp1	a0003	a0003c0003	a0003c0003t0004	a0003c0003t0004g0028	CLM	AMR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01123	hp2	a0026	a0026c0026	a0026c0026t0001	a0026c0026t0001g0053	CLM	AMR	ABCA13	chr7	48166458	48652497
ABCA3_chr16_2270881_2345728	HG01123	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0025	CLM	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG01123	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0067	CLM	AMR	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	HG01123	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0293	CLM	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG01123	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0049	CLM	AMR	ABCA5	chr17	69239311	69332133