Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01978	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PEL	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01978	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0275	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01978	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0330	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01978	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0001	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01978	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0113	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG01978	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0361	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01978	hp2	a0002	a0002c0003	a0002c0003t0008	a0002c0003t0008g0041	PEL	AMR	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PEL	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01978	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0045	PEL	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01978	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0110	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01978	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0318	PEL	AMR	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG01978	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	PEL	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01978	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0052	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	PEL	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	PEL	AMR	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG01978	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0043	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01978	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0204	PEL	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01978	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0300	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01978	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0222	PEL	AMR	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	HG01978	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0098	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01978	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0244	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0110	PEL	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01978	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0047	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01978	hp2	a0011	a0011c0018	a0011c0018t0001	a0011c0018t0001g0090	PEL	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01978	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0160	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01978	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0236	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01978	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0265	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01978	hp2	a0004	a0004c0004	a0004c0004t0011	a0004c0004t0011g0316	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01978	hp1	a0001	a0001c0021	a0001c0021t0003	a0001c0021t0003g0174	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01978	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0170	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG01978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01978	hp2	a0006	a0006c0012	a0006c0012t0010	a0006c0012t0010g0198	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01978	hp1	a0003	a0003c0021	a0003c0021t0001	a0003c0021t0001g0140	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01978	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0021	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG01978	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0053	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG01978	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0050	PEL	AMR	ABCA3	chr16	2270881	2345728