Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01981	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PEL	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01981	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0062	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01981	hp2	a0001	a0001c0001	a0001c0001t0041	a0001c0001t0041g0037	PEL	AMR	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	HG01981	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0167	PEL	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01981	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	PEL	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01981	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01981	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0369	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0195	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PEL	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	PEL	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	PEL	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01981	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0188	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01981	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0106	PEL	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01981	hp1	a0002	a0002c0002	a0002c0002t0024	a0002c0002t0024g0122	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01981	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0139	PEL	AMR	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	HG01981	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0020	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01981	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0032	PEL	AMR	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG01981	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0052	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01981	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0217	PEL	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01981	hp1	a0005	a0005c0010	a0005c0010t0010	a0005c0010t0010g0123	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01981	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0218	PEL	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG01981	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01981	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01981	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0245	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	PEL	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01981	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	PEL	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AATF_chr17_36943954_37061871	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0168	PEL	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0224	PEL	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG01981	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0004	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01981	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0152	PEL	AMR	AATK	chr17	81112295	81171221
ABCA13_chr7_48166458_48652497	HG01981	hp1	a0072	a0072c0069	a0072c0069t0001	a0072c0069t0001g0144	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01981	hp2	a0003	a0003c0003	a0003c0003t0004	a0003c0003t0004g0029	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA4_chr1_93987834_94126148	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG01981	hp2	a0045	a0045c0096	a0045c0096t0001	a0045c0096t0001g0097	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCB10_chr1_229511582_229563707	HG01981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	PEL	AMR	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	HG01981	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PEL	AMR	ABCB10	chr1	229511582	229563707
ABCB1_chr7_87498017_87605884	HG01981	hp1	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0045	PEL	AMR	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	HG01981	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0196	PEL	AMR	ABCB1	chr7	87498017	87605884