Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02273	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0233	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0206	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02273	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0306	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02273	hp1	a0011	a0011c0024	a0011c0024t0001	a0011c0024t0001g0214	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02273	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0108	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG02273	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0303	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02273	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0010	PEL	AMR	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	HG02273	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0313	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02273	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0107	PEL	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02273	hp1	a0002	a0002c0002	a0002c0002t0024	a0002c0002t0024g0004	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02273	hp2	a0002	a0002c0002	a0002c0002t0019	a0002c0002t0019g0007	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02273	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0046	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02273	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	PEL	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0084	PEL	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02273	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0142	PEL	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG02273	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0034	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02273	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0258	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	PEL	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02273	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02273	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0273	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02273	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0221	PEL	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02273	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0052	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02273	hp2	a0001	a0001c0020	a0001c0020t0001	a0001c0020t0001g0064	PEL	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	PEL	AMR	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02273	hp2	a0001	a0001c0001	a0001c0001t0025	a0001c0001t0025g0193	PEL	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG02273	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0307	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02273	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0084	PEL	AMR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	HG02273	hp1	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0309	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02273	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0142	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	HG02273	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02273	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG02273	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02273	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	HG02273	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0237	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02273	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0241	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA9_chr17_68969488_69065927	HG02273	hp1	a0006	a0006c0010	a0006c0010t0002	a0006c0010t0002g0144	PEL	AMR	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	HG02273	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0066	PEL	AMR	ABCA9	chr17	68969488	69065927