JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	PEL	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02300	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0017	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02300	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0165	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02300	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0239	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02300	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0013	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG02300	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0020	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02300	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0301	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02300	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	PEL	AMR	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	HG02300	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0006	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02300	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0079	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PEL	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02300	hp1	a0002	a0002c0007	a0002c0007t0005	a0002c0007t0005g0096	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PEL	AMR	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	HG02300	hp1	a0001	a0001c0001	a0001c0001t0093	a0001c0001t0093g0121	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02300	hp2	a0001	a0001c0001	a0001c0001t0119	a0001c0001t0119g0181	PEL	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02300	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02300	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02300	hp2	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02300	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0202	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02300	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0201	PEL	AMR	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02300	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0219	PEL	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02300	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0297	PEL	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02300	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0187	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02300	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0167	PEL	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	PEL	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	PEL	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02300	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0045	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02300	hp2	a0003	a0003c0045	a0003c0045t0002	a0003c0045t0002g0156	PEL	AMR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	HG02300	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0266	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02300	hp2	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0320	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG02300	hp1	a0034	a0034c0103	a0034c0103t0007	a0034c0103t0007g0240	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02300	hp2	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0070	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG02300	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02300	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG02300	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02300	hp2	a0012	a0012c0012	a0012c0012t0001	a0012c0012t0001g0041	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCB10_chr1_229511582_229563707	HG02300	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0004	PEL	AMR	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	HG02300	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	PEL	AMR	ABCB10	chr1	229511582	229563707