Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CDX	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02155	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	CDX	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02155	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0194	CDX	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02155	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0227	CDX	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0232	CDX	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02155	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	CDX	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02155	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	CDX	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02155	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0121	CDX	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02155	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0220	CDX	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02155	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0183	CDX	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	CDX	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02155	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CDX	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG02155	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0225	CDX	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02155	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0240	CDX	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02155	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0002	CDX	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02155	hp1	a0002	a0002c0004	a0002c0004t0026	a0002c0004t0026g0030	CDX	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02155	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	CDX	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02155	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	CDX	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02155	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	CDX	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG02155	hp1	a0002	a0002c0002	a0002c0002t0013	a0002c0002t0013g0158	CDX	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02155	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	CDX	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0371	CDX	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02155	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	CDX	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02155	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AANAT	chr17	76462603	76475117
AARS1_chr16_70247298_70294506	HG02155	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0237	CDX	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02155	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0195	CDX	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02155	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	CDX	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	CDX	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02155	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CDX	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0077	CDX	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02155	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0027	CDX	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	CDX	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02155	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0238	CDX	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02155	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0137	CDX	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02155	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0203	CDX	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02155	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0088	CDX	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02155	hp2	a0002	a0002c0005	a0002c0005t0003	a0002c0005t0003g0132	CDX	EAS	ABAT	chr16	8669617	8789570
ABCA12_chr2_214926542_215143626	HG02155	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0115	CDX	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02155	hp2	a0001	a0001c0004	a0001c0004t0003	a0001c0004t0003g0062	CDX	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG02155	hp1	a0010	a0010c0007	a0010c0007t0003	a0010c0007t0003g0149	CDX	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02155	hp2	a0002	a0002c0011	a0002c0011t0004	a0002c0011t0004g0263	CDX	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	CDX	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02155	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0054	CDX	EAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	HG02155	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	CDX	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG02155	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0277	CDX	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG02155	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0095	CDX	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02155	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0042	CDX	EAS	ABCA5	chr17	69239311	69332133