Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHB	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	A1BG	chr19	58340183	58358492
A3GALT2_chr1_33301766_33326098	NA18747	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0017	CHB	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18747	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0236	CHB	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18747	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0181	CHB	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18747	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0204	CHB	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	CHB	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18747	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	CHB	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CHB	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18747	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0013	CHB	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18747	hp2	a0002	a0002c0002	a0002c0002t0025	a0002c0002t0025g0003	CHB	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CHB	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18747	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	CHB	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18747	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0232	CHB	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18747	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0149	CHB	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18747	hp1	a0001	a0001c0001	a0001c0001t0149	a0001c0001t0149g0280	CHB	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18747	hp2	a0002	a0002c0002	a0002c0002t0013	a0002c0002t0013g0112	CHB	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18747	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0064	CHB	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CHB	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHB	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	CHB	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHB	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18747	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0019	CHB	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHB	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18747	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	CHB	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18747	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0198	CHB	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18747	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CHB	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	CHB	EAS	AARS2	chr6	44293731	44318347
AASS_chr7_122068549_122149249	NA18747	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0307	CHB	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	CHB	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18747	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0128	CHB	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	CHB	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18747	hp1	a0002	a0002c0005	a0002c0005t0015	a0002c0005t0015g0084	CHB	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18747	hp2	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0360	CHB	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	NA18747	hp1	a0001	a0001c0005	a0001c0005t0004	a0001c0005t0004g0167	CHB	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18747	hp2	a0007	a0007c0003	a0007c0003t0003	a0007c0003t0003g0229	CHB	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	NA18747	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0244	CHB	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18747	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0145	CHB	EAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	NA18747	hp1	a0001	a0001c0013	a0001c0013t0001	a0001c0013t0001g0197	CHB	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	CHB	EAS	ABCA4	chr1	93987834	94126148
ABCA8_chr17_68862289_68960392	NA18747	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0063	CHB	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0209	CHB	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18747	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0146	CHB	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	CHB	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA18747	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0114	CHB	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18747	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	CHB	EAS	ABCB10	chr1	229511582	229563707