Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG00438	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0262	CHS	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG00438	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0192	CHS	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG00438	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0210	CHS	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00438	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0178	CHS	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0257	CHS	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0269	CHS	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG00438	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	CHS	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG00438	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0157	CHS	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG00438	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0325	CHS	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00438	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0327	CHS	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	CHS	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	CHS	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	CHS	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHS	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG00438	hp1	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0057	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00438	hp2	a0002	a0002c0002	a0002c0002t0060	a0002c0002t0060g0013	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00438	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0005	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	CHS	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	CHS	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	CHS	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00438	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0012	CHS	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG00438	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0103	CHS	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG00438	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0219	CHS	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG00438	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0235	CHS	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG00438	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0132	CHS	EAS	AAK1	chr2	69452997	69648739
AANAT_chr17_76462603_76475117	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG00438	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CHS	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	CHS	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG00438	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0207	CHS	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG00438	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CHS	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	CHS	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	CHS	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG00438	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0082	CHS	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG00438	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0139	CHS	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	CHS	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	CHS	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00438	hp2	a0010	a0010c0014	a0010c0014t0001	a0010c0014t0001g0251	CHS	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG00438	hp1	a0002	a0002c0002	a0002c0002t0017	a0002c0002t0017g0055	CHS	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG00438	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0167	CHS	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG00438	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0065	CHS	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG00438	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0059	CHS	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG00438	hp1	a0001	a0001c0003	a0001c0003t0011	a0001c0003t0011g0139	CHS	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG00438	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0027	CHS	EAS	ABCA12	chr2	214926542	215143626
ABCA2_chr9_137002234_137033237	HG00438	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	CHS	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG00438	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	CHS	EAS	ABCA2	chr9	137002234	137033237