Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	CHS	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG00673	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0040	CHS	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG00673	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0161	CHS	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	CHS	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG00673	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0249	CHS	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00673	hp2	a0027	a0027c0070	a0027c0070t0001	a0027c0070t0001g0245	CHS	EAS	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	HG00673	hp1	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0004	CHS	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00673	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0101	CHS	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHS	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	CHS	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CHS	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	CHS	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG00673	hp1	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0006	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00673	hp2	a0002	a0002c0002	a0002c0002t0037	a0002c0002t0037g0022	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00673	hp2	a0002	a0002c0020	a0002c0020t0042	a0002c0020t0042g0020	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	CHS	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG00673	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0041	CHS	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	CHS	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CHS	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	CHS	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0284	CHS	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG00673	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0197	CHS	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG00673	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0066	CHS	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG00673	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0007	CHS	EAS	AAMDC	chr11	77816144	77877352
AAR2_chr20_36231478_36261933	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	CHS	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG00673	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CHS	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHS	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG00673	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CHS	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00673	hp2	a0002	a0002c0006	a0002c0006t0004	a0002c0006t0004g0023	CHS	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CHS	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG00673	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	CHS	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG00673	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0240	CHS	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00673	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0268	CHS	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG00673	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0070	CHS	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	CHS	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG00673	hp1	a0002	a0002c0005	a0002c0005t0003	a0002c0005t0003g0207	CHS	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG00673	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0124	CHS	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	HG00673	hp1	a0003	a0003c0002	a0003c0002t0028	a0003c0002t0028g0261	CHS	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG00673	hp2	a0002	a0002c0037	a0002c0037t0011	a0002c0037t0011g0116	CHS	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG00673	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	CHS	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	CHS	EAS	ABCA2	chr9	137002234	137033237
ABCA7_chr19_1035107_1070572	HG00673	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0023	CHS	EAS	ABCA7	chr19	1035107	1070572
ABCA7_chr19_1035107_1070572	HG00673	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0016	CHS	EAS	ABCA7	chr19	1035107	1070572
ABCB10_chr1_229511582_229563707	HG00673	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0146	CHS	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	HG00673	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0141	CHS	EAS	ABCB10	chr1	229511582	229563707