Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18947	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0051	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0256	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18947	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0006	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18947	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18947	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18947	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18947	hp1	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18947	hp2	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18947	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18947	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18947	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0083	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18947	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0201	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18947	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0196	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18947	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18947	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0053	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18947	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0028	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18947	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0165	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18947	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	AASS	chr7	122068549	122149249
ABCA4_chr1_93987834_94126148	NA18947	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0043	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18947	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0191	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18947	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0075	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18947	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0256	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCB11_chr2_168915781_169036324	NA18947	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0173	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18947	hp2	a0001	a0001c0005	a0001c0005t0030	a0001c0005t0030g0106	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB8_chr7_151023450_151052782	NA18947	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18947	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	ABCB8	chr7	151023450	151052782