Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18964	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0185	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA18964	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18964	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0044	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18964	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0152	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18964	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0330	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18964	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0007	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18964	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0017	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18964	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0090	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18964	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0341	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18964	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0138	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18964	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0061	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18964	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0270	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARS2_chr6_44293731_44318347	NA18964	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0016	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18964	hp1	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18964	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0115	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18964	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0122	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18964	hp2	a0008	a0008c0011	a0008c0011t0002	a0008c0011t0002g0206	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA18964	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0074	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18964	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0311	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA18964	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0041	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18964	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0276	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA18964	hp1	a0014	a0014c0054	a0014c0054t0010	a0014c0054t0010g0251	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18964	hp2	a0016	a0016c0019	a0016c0019t0018	a0016c0019t0018g0177	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18964	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0115	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA8_chr17_68862289_68960392	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0222	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18964	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB1_chr7_87498017_87605884	NA18964	hp1	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0270	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18964	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0175	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA18964	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0078	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18964	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0066	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	NA18964	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0287	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18964	hp2	a0003	a0003c0010	a0003c0010t0001	a0003c0010t0001g0317	JPT	EAS	ABCB5	chr7	20610667	20762008