Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18971	hp1	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0247	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18971	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0348	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0235	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18971	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18971	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0013	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18971	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0138	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18971	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0311	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18971	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18971	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0216	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18971	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0140	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18971	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0006	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18971	hp2	a0002	a0002c0002	a0002c0002t0036	a0002c0002t0036g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18971	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18971	hp2	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18971	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18971	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18971	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0104	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18971	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0023	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18971	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0263	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0294	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18971	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0030	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18971	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0289	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0100	JPT	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18971	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0029	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18971	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA18971	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18971	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0198	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18971	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0051	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18971	hp2	a0001	a0001c0035	a0001c0035t0002	a0001c0035t0002g0282	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA18971	hp1	a0014	a0014c0038	a0014c0038t0008	a0014c0038t0008g0195	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA18971	hp2	a0001	a0001c0006	a0001c0006t0023	a0001c0006t0023g0146	JPT	EAS	ABCA12	chr2	214926542	215143626