Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18975	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0164	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0145	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18975	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0184	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0247	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18975	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0232	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18975	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0180	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18975	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18975	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0082	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18975	hp2	a0001	a0001c0012	a0001c0012t0004	a0001c0012t0004g0244	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18975	hp1	a0002	a0002c0002	a0002c0002t0019	a0002c0002t0019g0030	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18975	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18975	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0263	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18975	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18975	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0235	JPT	EAS	AAMDC	chr11	77816144	77877352
AARD_chr8_116933207_116949487	NA18975	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18975	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18975	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0225	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18975	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18975	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA18975	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0121	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18975	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0161	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18975	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18975	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0041	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18975	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0015	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18975	hp1	a0002	a0002c0006	a0002c0006t0002	a0002c0006t0002g0118	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18975	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0284	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18975	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0230	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18975	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0032	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA5_chr17_69239311_69332133	NA18975	hp1	a0002	a0002c0001	a0002c0001t0011	a0002c0001t0011g0298	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18975	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0025	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA8_chr17_68862289_68960392	NA18975	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0060	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB5_chr7_20610667_20762008	NA18975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18975	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0032	JPT	EAS	ABCB5	chr7	20610667	20762008