Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18990	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0138	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18990	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0289	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18990	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0018	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0209	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18990	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0044	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18990	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0006	JPT	EAS	A3GALT2	chr1	33301766	33326098
AACS_chr12_125060435_125148316	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0281	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18990	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0182	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18990	hp2	a0008	a0008c0008	a0008c0008t0001	a0008c0008t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18990	hp1	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18990	hp2	a0001	a0001c0012	a0001c0012t0008	a0001c0012t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	NA18990	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0110	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18990	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0015	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18990	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0256	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18990	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18990	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0301	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18990	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0085	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18990	hp2	a0001	a0001c0010	a0001c0010t0001	a0001c0010t0001g0068	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18990	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	JPT	EAS	AASDHPPT	chr11	106072662	106103695
ABAT_chr16_8669617_8789570	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0287	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	NA18990	hp1	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0205	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18990	hp2	a0007	a0007c0003	a0007c0003t0002	a0007c0003t0002g0038	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA9_chr17_68969488_69065927	NA18990	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0091	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB1_chr7_87498017_87605884	NA18990	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0243	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18990	hp2	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0016	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB7_chrX_75046048_75161283	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0170	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC10_chr6_43422541_43455427	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC2_chr10_99777640_99857594	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0325	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18990	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0110	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA18990	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0052	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18990	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC6_chr16_16144565_16228494	NA18990	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0093	JPT	EAS	ABCC6	chr16	16144565	16228494