Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18993	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0081	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18993	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18993	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0025	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18993	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0163	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0291	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18993	hp2	a0018	a0018c0032	a0018c0032t0002	a0018c0032t0002g0066	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18993	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0084	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA18993	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0073	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18993	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0167	JPT	EAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0352	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18993	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0130	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA18993	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18993	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0110	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18993	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA18993	hp1	a0001	a0001c0001	a0001c0001t0112	a0001c0001t0112g0170	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18993	hp2	a0002	a0002c0002	a0002c0002t0015	a0002c0002t0015g0005	JPT	EAS	AAK1	chr2	69452997	69648739
AANAT_chr17_76462603_76475117	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18993	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0257	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18993	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0253	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18993	hp2	a0001	a0001c0002	a0001c0002t0019	a0001c0002t0019g0071	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18993	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18993	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0282	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18993	hp2	a0001	a0001c0060	a0001c0060t0002	a0001c0060t0002g0056	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA18993	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0273	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18993	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0045	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA5_chr17_69239311_69332133	NA18993	hp1	a0001	a0001c0024	a0001c0024t0001	a0001c0024t0001g0145	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18993	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0259	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18993	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0219	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18993	hp2	a0008	a0008c0008	a0008c0008t0002	a0008c0008t0002g0018	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA18993	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0009	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18993	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0128	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA18993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0212	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18993	hp2	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0270	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB1_chr7_87498017_87605884	NA18993	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0224	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	ABCB1	chr7	87498017	87605884