Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19002	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0260	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	JPT	EAS	A1CF	chr10	50794409	50890627
A4GALT_chr22_42687121_42725870	NA19002	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0081	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19002	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0142	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19002	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19002	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0075	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0275	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19002	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0125	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19002	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19002	hp2	a0002	a0002c0002	a0002c0002t0036	a0002c0002t0036g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19002	hp1	a0002	a0002c0018	a0002c0018t0003	a0002c0018t0003g0005	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19002	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	NA19002	hp1	a0001	a0001c0003	a0001c0003t0082	a0001c0003t0082g0098	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19002	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0196	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19002	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19002	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19002	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0171	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19002	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0251	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19002	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0277	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19002	hp1	a0002	a0002c0002	a0002c0002t0029	a0002c0002t0029g0208	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19002	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0148	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19002	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0314	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19002	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0271	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19002	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0159	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19002	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0026	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	NA19002	hp1	a0007	a0007c0003	a0007c0003t0016	a0007c0003t0016g0029	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19002	hp2	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0184	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19002	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	NA19002	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0232	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19002	hp2	a0008	a0008c0017	a0008c0017t0001	a0008c0017t0001g0123	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	NA19002	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0284	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19002	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0073	JPT	EAS	ABCA4	chr1	93987834	94126148