Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19011	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19011	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0019	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19011	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0174	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0244	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	NA19011	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0324	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19011	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0063	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19011	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0061	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19011	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0217	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19011	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0143	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19011	hp1	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0043	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19011	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19011	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19011	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19011	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0215	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19011	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0084	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19011	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0101	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19011	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0193	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19011	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0063	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0053	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19011	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19011	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0092	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19011	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19011	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0005	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19011	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0300	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19011	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0095	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19011	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0064	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	NA19011	hp1	a0010	a0010c0031	a0010c0031t0003	a0010c0031t0003g0115	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA19011	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0210	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19011	hp2	a0006	a0006c0004	a0006c0004t0002	a0006c0004t0002g0133	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19011	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0054	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19011	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA19011	hp1	a0035	a0035c0063	a0035c0063t0001	a0035c0063t0001g0033	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19011	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0034	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA9_chr17_68969488_69065927	NA19011	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0261	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19011	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0247	JPT	EAS	ABCA9	chr17	68969488	69065927