Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA19057	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0251	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19057	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0052	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0255	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19057	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19057	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0221	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19057	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0206	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19057	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0035	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19057	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19057	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL3_chr1_12711110_12733760	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19057	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19057	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0002	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19057	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0118	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19057	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0051	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0359	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19057	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19057	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0277	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19057	hp2	a0001	a0001c0013	a0001c0013t0001	a0001c0013t0001g0086	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19057	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19057	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19057	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0127	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19057	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0289	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19057	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0174	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19057	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0115	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA19057	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0133	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19057	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0083	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19057	hp1	a0001	a0001c0003	a0001c0003t0015	a0001c0003t0015g0130	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0293	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA3_chr16_2270881_2345728	NA19057	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19057	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	JPT	EAS	ABCA3	chr16	2270881	2345728