Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19060	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19060	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19060	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0105	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19060	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0180	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19060	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0334	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA19060	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0042	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19060	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0171	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19060	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0131	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19060	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0071	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19060	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19060	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19060	hp1	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0098	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19060	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0153	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19060	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19060	hp2	a0003	a0003c0005	a0003c0005t0007	a0003c0005t0007g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0168	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19060	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19060	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19060	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19060	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0013	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19060	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0119	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19060	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0150	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19060	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0250	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19060	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0206	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0344	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19060	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0186	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19060	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19060	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AAMP	chr2	218259129	218275137
AARS1_chr16_70247298_70294506	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19060	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0288	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA19060	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19060	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19060	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0244	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19060	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	NA19060	hp1	a0002	a0002c0002	a0002c0002t0009	a0002c0002t0009g0192	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19060	hp2	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0062	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19060	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0182	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19060	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0247	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19060	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0060	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19060	hp2	a0001	a0001c0003	a0001c0003t0011	a0001c0003t0011g0120	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	NA19060	hp1	a0009	a0009c0012	a0009c0012t0002	a0009c0012t0002g0094	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA19060	hp2	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0032	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA19060	hp1	a0002	a0002c0011	a0002c0011t0007	a0002c0011t0007g0119	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19060	hp2	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0123	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19060	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19060	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	JPT	EAS	ABCA2	chr9	137002234	137033237