Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19070	hp1	a0001	a0001c0003	a0001c0003t0007	a0001c0003t0007g0232	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19070	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0150	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19070	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0262	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0193	JPT	EAS	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	NA19070	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0329	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19070	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0110	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19070	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19070	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19070	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19070	hp2	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	JPT	EAS	AADAT	chr4	170055222	170094956
AAMP_chr2_218259129_218275137	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AASDHPPT_chr11_106072662_106103695	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19070	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19070	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0011	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19070	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0014	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19070	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0141	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA19070	hp1	a0021	a0021c0055	a0021c0055t0001	a0021c0055t0001g0099	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19070	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0100	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19070	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0001	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19070	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0172	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19070	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0064	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19070	hp1	a0001	a0001c0009	a0001c0009t0008	a0001c0009t0008g0189	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19070	hp2	a0011	a0011c0053	a0011c0053t0002	a0011c0053t0002g0129	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA2_chr9_137002234_137033237	NA19070	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0076	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19070	hp2	a0001	a0001c0012	a0001c0012t0001	a0001c0012t0001g0016	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19070	hp2	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0051	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	NA19070	hp1	a0002	a0002c0001	a0002c0001t0009	a0002c0001t0009g0290	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19070	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0058	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19070	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0228	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0205	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0247	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0231	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19070	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0233	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA19070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0241	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19070	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0179	JPT	EAS	ABCB11	chr2	168915781	169036324