Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19072	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0023	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19072	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0002	JPT	EAS	A1CF	chr10	50794409	50890627
A4GALT_chr22_42687121_42725870	NA19072	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0113	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19072	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0038	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19072	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19072	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0104	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19072	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0031	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA19072	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19072	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19072	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0075	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0282	JPT	EAS	AAGAB	chr15	67195667	67259661
AARS2_chr6_44293731_44318347	NA19072	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0096	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19072	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0047	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA19072	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0285	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0157	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19072	hp1	a0001	a0001c0040	a0001c0040t0001	a0001c0040t0001g0108	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19072	hp2	a0029	a0029c0050	a0029c0050t0001	a0029c0050t0001g0287	JPT	EAS	AATK	chr17	81112295	81171221
ABCA5_chr17_69239311_69332133	NA19072	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0246	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19072	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0133	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19072	hp1	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0152	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19072	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0217	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB4_chr7_87396696_87480680	NA19072	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0142	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19072	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0088	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB7_chrX_75046048_75161283	NA19072	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0036	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCF3_chr3_184181199_184199005	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCF3	chr3	184181199	184199005
ABHD11_chr7_73731094_73743802	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD11_chr7_73731094_73743802	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD11	chr7	73731094	73743802
ABHD14A_chr3_51970064_51986196	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	JPT	EAS	ABHD14A	chr3	51970064	51986196
ABHD14B_chr3_51963515_51979049	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABHD14B	chr3	51963515	51979049
ABHD14B_chr3_51963515_51979049	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD14B	chr3	51963515	51979049
ABHD16A_chr6_31681955_31708324	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	NA19072	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0019	JPT	EAS	ABHD16A	chr6	31681955	31708324
ABHD16B_chr20_63856498_63867988	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ABHD16B	chr20	63856498	63867988
ABHD16B_chr20_63856498_63867988	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ABHD16B	chr20	63856498	63867988
ABHD17A_chr19_1871810_1890496	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABHD17A	chr19	1871810	1890496
ABHD1_chr2_27118815_27135812	NA19072	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	JPT	EAS	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABHD1	chr2	27118815	27135812
ABHD6_chr3_58232792_58299734	NA19072	hp1	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0191	JPT	EAS	ABHD6	chr3	58232792	58299734
ABHD6_chr3_58232792_58299734	NA19072	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0081	JPT	EAS	ABHD6	chr3	58232792	58299734
ABHD8_chr19_17287131_17308425	NA19072	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0265	JPT	EAS	ABHD8	chr19	17287131	17308425
ABHD8_chr19_17287131_17308425	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0214	JPT	EAS	ABHD8	chr19	17287131	17308425
ABITRAM_chr9_108929400_108945954	NA19072	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABITRAM_chr9_108929400_108945954	NA19072	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABL1_chr9_130830254_130892675	NA19072	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0028	JPT	EAS	ABL1	chr9	130830254	130892675