Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0297	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19084	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0231	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA19084	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0252	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19084	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0006	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19084	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0053	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19084	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0193	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19084	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19084	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19084	hp1	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0144	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA19084	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0210	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19084	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0141	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19084	hp2	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0210	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19084	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0144	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA19084	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0216	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19084	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0242	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19084	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0045	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19084	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0028	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19084	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19084	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0016	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0141	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA19084	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0170	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19084	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19084	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0159	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19084	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0125	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0243	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19084	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0143	JPT	EAS	AATF	chr17	36943954	37061871
ABAT_chr16_8669617_8789570	NA19084	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19084	hp2	a0001	a0001c0001	a0001c0001t0042	a0001c0001t0042g0087	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	NA19084	hp1	a0009	a0009c0018	a0009c0018t0003	a0009c0018t0003g0248	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19084	hp2	a0006	a0006c0004	a0006c0004t0045	a0006c0004t0045g0155	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	NA19084	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0234	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19084	hp2	a0005	a0005c0043	a0005c0043t0001	a0005c0043t0001g0194	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19084	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0041	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19084	hp2	a0014	a0014c0021	a0014c0021t0002	a0014c0021t0002g0162	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19084	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0172	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19084	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0242	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB11_chr2_168915781_169036324	NA19084	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0174	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19084	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0117	JPT	EAS	ABCB11	chr2	168915781	169036324