Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	KHV	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02129	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0166	KHV	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02129	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0069	KHV	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	KHV	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0164	KHV	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02129	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02129	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02129	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0037	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02129	hp2	a0001	a0001c0001	a0001c0001t0026	a0001c0001t0026g0171	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02129	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	KHV	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	KHV	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	KHV	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0293	KHV	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02129	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0177	KHV	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0105	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02129	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0002	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	KHV	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02129	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	KHV	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	KHV	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	KHV	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02129	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0096	KHV	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02129	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0361	KHV	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	HG02129	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02129	hp2	a0006	a0006c0010	a0006c0010t0001	a0006c0010t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02129	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	KHV	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	KHV	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02129	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0271	KHV	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02129	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	KHV	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	HG02129	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0011	KHV	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02129	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0191	KHV	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0202	KHV	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02129	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0313	KHV	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	HG02129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0026	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02129	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0014	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0118	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02129	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0141	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG02129	hp1	a0007	a0007c0003	a0007c0003t0004	a0007c0003t0004g0027	KHV	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02129	hp2	a0013	a0013c0013	a0013c0013t0025	a0013c0013t0025g0033	KHV	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG02129	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0138	KHV	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02129	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0055	KHV	EAS	ABCA2	chr9	137002234	137033237