Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	TSI	EUR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0092	TSI	EUR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	TSI	EUR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA20752	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0055	TSI	EUR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA20752	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0058	TSI	EUR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA20752	hp2	a0003	a0003c0005	a0003c0005t0003	a0003c0005t0003g0095	TSI	EUR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA20752	hp1	a0011	a0011c0012	a0011c0012t0000	a0011c0012t0000g0137	TSI	EUR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA20752	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	TSI	EUR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA20752	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0002	TSI	EUR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA20752	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0376	TSI	EUR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA20752	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0140	TSI	EUR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA20752	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	TSI	EUR	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA20752	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0076	TSI	EUR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA20752	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0253	TSI	EUR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA20752	hp1	a0002	a0002c0002	a0002c0002t0057	a0002c0002t0057g0007	TSI	EUR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA20752	hp2	a0001	a0001c0001	a0001c0001t0045	a0001c0001t0045g0011	TSI	EUR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	TSI	EUR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA20752	hp2	a0004	a0004c0007	a0004c0007t0004	a0004c0007t0004g0091	TSI	EUR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	TSI	EUR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	TSI	EUR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	TSI	EUR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA20752	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	TSI	EUR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	TSI	EUR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	TSI	EUR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA20752	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0188	TSI	EUR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0281	TSI	EUR	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	TSI	EUR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	TSI	EUR	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	TSI	EUR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA20752	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	TSI	EUR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	TSI	EUR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA20752	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0269	TSI	EUR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	TSI	EUR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	TSI	EUR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	TSI	EUR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	TSI	EUR	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	NA20752	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0229	TSI	EUR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA20752	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0085	TSI	EUR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA20752	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0193	TSI	EUR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	TSI	EUR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA20752	hp1	a0002	a0002c0004	a0002c0004t0008	a0002c0004t0008g0176	TSI	EUR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	TSI	EUR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA20752	hp1	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0256	TSI	EUR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA20752	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0060	TSI	EUR	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA20752	hp1	a0004	a0004c0079	a0004c0079t0006	a0004c0079t0006g0147	TSI	EUR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA20752	hp2	a0033	a0033c0099	a0033c0099t0002	a0033c0099t0002g0062	TSI	EUR	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA20752	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0291	TSI	EUR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA20752	hp2	a0009	a0009c0027	a0009c0027t0004	a0009c0027t0004g0124	TSI	EUR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA20752	hp1	a0001	a0001c0002	a0001c0002t0007	a0001c0002t0007g0097	TSI	EUR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA20752	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	TSI	EUR	ABCA2	chr9	137002234	137033237